Cytosim  PI
Cytoskeleton Simulator
FiberNaked Member List

This is the complete list of members for FiberNaked, including all inherited members.

abscissa(FiberEnd end) const FiberNaked
abscissa(real ab, FiberEnd from) const FiberNaked
abscissaM() const FiberNakedinline
abscissaP() const FiberNakedinline
abscissaP(const real n) const FiberNakedinline
addBrownianForces(real *rhs, real sc) const Mecableinlinevirtual
addNoise(real amount)PointSet
addPoint(Vector const &w)PointSet
addProjectionDiff(const real *X, real *Y) const Mecableinlinevirtual
addr() const PointSetinline
addRigidity(const real *X, real *Y) const Mecableinlinevirtual
addRigidityMatUp(Matrix &mB, int offset) const Mecableinlinevirtual
addrPoint(const unsigned p) const PointSetinline
addSegmentM()FiberNaked
addSegmentP()FiberNaked
adjustSegmentation()FiberNaked
allocateBlock(unsigned)Mecable
allocatePoints(unsigned int nbp)PointSetvirtual
block() const Mecableinline
Buddy() (defined in Buddy)Buddyinline
buddy(unsigned int ix) const Buddyinline
buddy(Buddy *b, unsigned int ix)Buddyinline
calculateMomentum(real[], bool divide=false)PointSet
calculateMomentum(real[], real[], bool divide=false)PointSet
clearPoints()PointSetinline
cutM(real dlen)FiberNaked
cutP(real dlen)FiberNaked
deallocatePoints()PointSetvirtual
diffPoints(const real *src, const unsigned p)PointSetinlinestatic
diffPoints(const unsigned p) const PointSetinline
diffPoints(const unsigned int p, const unsigned int q) const PointSetinline
dir(real ab) const FiberNaked
dir(real ab, FiberEnd from) const FiberNaked
dirEnd(FiberEnd which) const FiberNaked
dirP(unsigned p) const FiberNakedinline
dragCoefficient() const =0Mecablepure virtual
exactEnd(FiberEnd) const FiberNaked
FiberNaked()FiberNaked
fleck() const Objectinline
fleck(int f) const Objectinline
foldPosition(const Modulo *)PointSetvirtual
foldPositionG(const Modulo *)PointSetvirtual
getForces(const real *ptr)PointSetinlinevirtual
Mecable::getForces(const real[])=0Mecablepure virtual
getPoints(const real *x)FiberNakedvirtual
Mecable::getPoints(const real[])=0Mecablepure virtual
goodbye(Buddy *)Buddyinlinevirtual
growM(real dlen)FiberNaked
growP(real dlen)FiberNaked
hello(Buddy *b)Buddyinline
infoSegments(real &, real &) const FiberNaked
interpolate(real ab) const FiberNaked
interpolate(real ab, FiberEnd from) const FiberNaked
interpolateCenter() const FiberNaked
interpolateEnd(FiberEnd) const FiberNaked
interpolateM(real ab) const FiberNaked
interpolateMinusEnd() const FiberNakedinline
interpolatePlusEnd() const FiberNakedinline
interpolatePoints(const unsigned int p, const unsigned int q, const real a) const PointSetinline
Inventoried()Inventoriedinline
join(FiberNaked const *fib)FiberNaked
lastPoint() const PointSetinline
lastSegment() const PointSetinline
length() const FiberNakedinline
linked() const Nodeinline
list() const Nodeinline
makeProjectionDiff(const real *forces)Mecableinlinevirtual
mark() const Objectinline
mark(int m)Objectinline
matIndex(Matrix::index_type index)Mecableinline
matIndex() const Mecableinline
Mecable()Mecable
minCosinus() const FiberNaked
minMaxSegments(real &, real &) const FiberNaked
Movable()Movableinline
movePoint(const unsigned int p, Vector const &w)PointSetinline
nbKinks(real threshold=0) const FiberNaked
nbPoints() const PointSetinlinevirtual
nbPoints(const unsigned n)PointSetinline
nbSegments() const PointSetinline
netForceP(const unsigned p) const PointSet
Mecable::netForceP(unsigned int p) const =0Mecablepure virtual
next() const Objectinline
nNextNodeprotected
nNumberInventoriedprotected
Node()Nodeinline
nPrevNodeprotected
number(Number n)Inventoriedinline
number() const Inventoriedinline
Object()Objectinline
objset() const Node
operator=(const PointSet &)PointSet
PointSet()PointSet
PointSet(const PointSet &)PointSet
pos(real ab) const FiberNaked
pos(real ab, FiberEnd from) const FiberNaked
posEnd(FiberEnd which) const FiberNaked
position() const PointSetvirtual
posM(real ab) const FiberNaked
posP(const unsigned p) const PointSetinline
Mecable::posP(unsigned int P) const =0Mecablepure virtual
prepareMecable()=0Mecablepure virtual
prev() const Objectinline
projectedForceOnEnd(FiberEnd which) const FiberNaked
property() const =0Objectpure virtual
psCenterPointSetprotected
psForPointSetprotected
psPosPointSetprotected
putPoints(real *) const PointSetvirtual
Mecable::putPoints(real[]) const =0Mecablepure virtual
read(InputWrapper &, Simul &)FiberNakedvirtual
readDirection(std::istream &, const Vector &, const Space *)Movablestatic
readPosition(std::istream &, const Space *)Movablestatic
readPrimitive(std::istream &, const Space *)Movablestatic
readReference(InputWrapper &, int &, Number &, int &, char pretag)Objectstatic
readRotation(std::istream &, const Vector &, const Space *)Movablestatic
reference() const Object
removePoint(unsigned int p)PointSet
resegment(unsigned int nb_points)FiberNaked
resetPoints()PointSet
reshape()FiberNaked
rotatable() const PointSetinlinevirtual
rotate(Rotation const &)PointSetvirtual
rotateP(Rotation const &)Movablevirtual
segmentation(real c)FiberNakedinline
segmentation() const FiberNakedinline
segmentationCub() const FiberNakedinline
setDragCoefficient()=0Mecablepure virtual
setInteractions(Meca &) const Mecableinlinevirtual
setLength(real len, FiberEnd ref)FiberNaked
setPoint(unsigned p, Vector const &w)PointSet
setPosition(Vector const &)Movablevirtual
setShape(const real pts[], unsigned n_pts, unsigned np)FiberNaked
setSpeedsFromForces(const real *X, real *Y, real sc=1.0, bool rhs=false) const =0Mecablepure virtual
setStraight(Vector const &pos, Vector const &dir)FiberNaked
setStraight(Vector const &pos, Vector const &dir, FiberEnd ref)FiberNaked
setStraight(Vector const &pos, Vector const &dir, real len, FiberEnd ref)FiberNaked
signature() const FiberNakedinline
signature(unsigned int s)FiberNakedinline
strReference(char, int, Number, int)Objectstatic
TAGObjectstatic
tag() const =0Objectpure virtual
translatable() const PointSetinlinevirtual
translate(Vector const &)PointSetvirtual
truncateM(unsigned int p)FiberNakedvirtual
truncateP(unsigned int p)FiberNakedvirtual
updateRange()=0FiberNakedprotectedpure virtual
useBlock() const Mecableinline
useBlock(bool b)Mecableinline
whichEndDomain(real ab, real lambda) const FiberNaked
within(const real ab) const FiberNakedinline
withinM(const real ab) const FiberNakedinline
withinP(const real ab) const FiberNakedinline
write(OutputWrapper &) const FiberNakedvirtual
writeNullReference(OutputWrapper &)Objectstatic
writeReference(OutputWrapper &) const Object
writeReference(OutputWrapper &, Tag tag) const Object
~Buddy()Buddyinlinevirtual
~FiberNaked()FiberNakedinline
~Inventoried()Inventoriedinline
~Mecable()Mecablevirtual
~Movable()Movableinlinevirtual
~Node()Nodevirtual
~PointSet()PointSetinlinevirtual